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Showing posts with the label Cytoscape
How To Write Namespaced Element Attributes With Lxml?

How To Write Namespaced Element Attributes With Lxml?

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I'm using lxml (2.2.8) to create and write out some XML (specifically XGMML). The app which wi… Read more How To Write Namespaced Element Attributes With Lxml?
Networkx Parse Gml Writing Unusable Gml Files

Networkx Parse Gml Writing Unusable Gml Files

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I've been trying to parse in some additional attributes to a networkx gml for use later on, and… Read more Networkx Parse Gml Writing Unusable Gml Files
Convert Adjacency Matrix Into Edgelist (csv File) For Cytoscape

Convert Adjacency Matrix Into Edgelist (csv File) For Cytoscape

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I have a large (200 columns/rows) adjacency matrix in a csv file. This details interactions between… Read more Convert Adjacency Matrix Into Edgelist (csv File) For Cytoscape