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Showing posts with the label Snakemake
Specifying Python Version Within Snakemake Using Script Parameter

Specifying Python Version Within Snakemake Using Script Parameter

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I have some code that I am incorporating into a Snakemake pipeline. I also want to be able to run t… Read more Specifying Python Version Within Snakemake Using Script Parameter
Star Index Issues To The Step 4

Star Index Issues To The Step 4

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I am trying to index a reference genome on a pipeline with snakemake and I made this rule: rule ref… Read more Star Index Issues To The Step 4
Snakemake: Tranverse Dag Depth-first?

Snakemake: Tranverse Dag Depth-first?

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Snakemake appears to traverse the DAG in a breadth-first manner. Is it possible (e.g. through an op… Read more Snakemake: Tranverse Dag Depth-first?